Pictures of DNA often look very tidy—the strands of the double helix neatly wind around each other, making it seem like ...

Physics and Python stuff. Most of the videos here are either adapted from class lectures or solving physics problems. I really like to use numerical calculations without all the fancy programming ...

Gravitational waves are energy-carrying waves produced by the acceleration or disturbance of massive objects. These waves, which were first directly observed in 2015, are known to be produced during ...

Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. Network methods and molecular dynamics (MD) simulations have become essential tools ...

This study shows, for the first time, the structure and snapshots of the dynamics of the full-length soluble Angiotensin-I converting enzyme dimer. The combination of structural and computational ...

Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. EncoderMap is a dimensionality reduction method that is tailored for the analysis of ...

Abstract: DeepMD-kit enables deep learning-based molecular dynamics (MD) simulations that require efficient parallelization to leverage modern HPC architectures. In this work, we optimize DeepMD-kit ...